diff --git a/src/storm/settings/modules/MultiObjectiveSettings.cpp b/src/storm/settings/modules/MultiObjectiveSettings.cpp
index efb046cd1..da8230d88 100644
--- a/src/storm/settings/modules/MultiObjectiveSettings.cpp
+++ b/src/storm/settings/modules/MultiObjectiveSettings.cpp
@@ -32,12 +32,12 @@ namespace storm {
                 this->addOption(storm::settings::OptionBuilder(moduleName, maxStepsOptionName, true, "Aborts the computation after the given number of refinement steps (= computed pareto optimal points).").setIsAdvanced()
                                 .addArgument(storm::settings::ArgumentBuilder::createUnsignedIntegerArgument("value", "the threshold for the number of refinement steps to be performed.").build()).build());
                 std::vector<std::string> memoryPatterns = {"positional", "goalmemory", "arbitrary", "counter"};
-                this->addOption(storm::settings::OptionBuilder(moduleName, schedulerRestrictionOptionName, false, "Restricts the class of considered schedulers to non-randomized schedulers with the provided memory pattern.")
+                this->addOption(storm::settings::OptionBuilder(moduleName, schedulerRestrictionOptionName, false, "Restricts the class of considered schedulers to non-randomized schedulers with the provided memory pattern.").setIsAdvanced()
                                 .addArgument(storm::settings::ArgumentBuilder::createStringArgument("memorypattern", "The pattern of the memory.").setDefaultValueString("positional").addValidatorString(ArgumentValidatorFactory::createMultipleChoiceValidator(memoryPatterns)).build())
                                 .addArgument(storm::settings::ArgumentBuilder::createUnsignedIntegerArgument("memorystates", "The Number of memory states (only if supported by the pattern).").setDefaultValueUnsignedInteger(0).build()).build());
-                this->addOption(storm::settings::OptionBuilder(moduleName, printResultsOptionName, true, "Prints intermediate results of the computation to standard output.").build());
+                this->addOption(storm::settings::OptionBuilder(moduleName, printResultsOptionName, true, "Prints intermediate results of the computation to standard output.").setIsAdvanced().build());
                 std::vector<std::string> encodingTypes = {"auto", "classic", "flow"};
-                this->addOption(storm::settings::OptionBuilder(moduleName, encodingOptionName, true, "The prefered type of encoding for constraint-based methods.")
+                this->addOption(storm::settings::OptionBuilder(moduleName, encodingOptionName, true, "The prefered type of encoding for constraint-based methods.").setIsAdvanced()
                                 .addArgument(storm::settings::ArgumentBuilder::createStringArgument("type", "The type.").setDefaultValueString("auto").addValidatorString(ArgumentValidatorFactory::createMultipleChoiceValidator(encodingTypes)).build()).build());
             }
             
diff --git a/src/storm/settings/modules/ResourceSettings.cpp b/src/storm/settings/modules/ResourceSettings.cpp
index 927258364..572b71556 100644
--- a/src/storm/settings/modules/ResourceSettings.cpp
+++ b/src/storm/settings/modules/ResourceSettings.cpp
@@ -17,8 +17,8 @@ namespace storm {
             const std::string ResourceSettings::printTimeAndMemoryOptionShortName = "tm";
 
             ResourceSettings::ResourceSettings() : ModuleSettings(moduleName) {
-                this->addOption(storm::settings::OptionBuilder(moduleName, timeoutOptionName, false, "If given, computation will abort after the timeout has been reached.").setShortName(timeoutOptionShortName)
-                                .addArgument(storm::settings::ArgumentBuilder::createUnsignedIntegerArgument("time", "The number of seconds after which to timeout.").setDefaultValueUnsignedInteger(0).build()).build());
+                this->addOption(storm::settings::OptionBuilder(moduleName, timeoutOptionName, false, "If given, computation will abort after the timeout has been reached.").setIsAdvanced().setShortName(timeoutOptionShortName)
+                                .addArgument(storm::settings::ArgumentBuilder::createUnsignedIntegerArgument("time", "Seconds after which to timeout.").setDefaultValueUnsignedInteger(0).build()).build());
                 this->addOption(storm::settings::OptionBuilder(moduleName, printTimeAndMemoryOptionName, false, "Prints CPU time and memory consumption at the end.").setShortName(printTimeAndMemoryOptionShortName).build());
             }
             
diff --git a/src/storm/settings/modules/TransformationSettings.cpp b/src/storm/settings/modules/TransformationSettings.cpp
index d948a48d9..4b0d50ae0 100644
--- a/src/storm/settings/modules/TransformationSettings.cpp
+++ b/src/storm/settings/modules/TransformationSettings.cpp
@@ -18,9 +18,9 @@ namespace storm {
 
             TransformationSettings::TransformationSettings() : ModuleSettings(moduleName) {
                 this->addOption(storm::settings::OptionBuilder(moduleName, chainEliminationOptionName, false,
-                                                               "If set, chains of non-Markovian states are eliminated if the resulting model is a Markov Automaton.").build());
+                                                               "If set, chains of non-Markovian states are eliminated if the resulting model is a Markov Automaton.").setIsAdvanced().build());
                 this->addOption(storm::settings::OptionBuilder(moduleName, ignoreLabelingOptionName, false,
-                                                               "If set, the elimination of chains ignores the labels for all non-Markovian states. This may cause wrong results.").build());
+                                                               "If set, the elimination of chains ignores the labels for all non-Markovian states. This may cause wrong results.").setIsAdvanced().build());
                 this->addOption(storm::settings::OptionBuilder(moduleName, toNondetOptionName, false, "If set, DTMCs/CTMCs are converted to MDPs/MAs (without actual nondeterminism) before model checking.").setIsAdvanced().build());
                 this->addOption(storm::settings::OptionBuilder(moduleName, toDiscreteTimeOptionName, false, "If set, CTMCs/MAs are converted to DTMCs/MDPs (which might or might not preserve the provided properties).").setIsAdvanced().build());
             }