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  1. /* -*- c++ -*- (enables emacs c++ mode) */
  2. /*===========================================================================
  3. Copyright (C) 2003-2015 Yves Renard
  4. This file is a part of GETFEM++
  5. Getfem++ is free software; you can redistribute it and/or modify it
  6. under the terms of the GNU Lesser General Public License as published
  7. by the Free Software Foundation; either version 3 of the License, or
  8. (at your option) any later version along with the GCC Runtime Library
  9. Exception either version 3.1 or (at your option) any later version.
  10. This program is distributed in the hope that it will be useful, but
  11. WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
  12. or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public
  13. License and GCC Runtime Library Exception for more details.
  14. You should have received a copy of the GNU Lesser General Public License
  15. along with this program; if not, write to the Free Software Foundation,
  16. Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301, USA.
  17. As a special exception, you may use this file as it is a part of a free
  18. software library without restriction. Specifically, if other files
  19. instantiate templates or use macros or inline functions from this file,
  20. or you compile this file and link it with other files to produce an
  21. executable, this file does not by itself cause the resulting executable
  22. to be covered by the GNU Lesser General Public License. This exception
  23. does not however invalidate any other reasons why the executable file
  24. might be covered by the GNU Lesser General Public License.
  25. ===========================================================================*/
  26. // This file is a modified version of cholesky.h from ITL.
  27. // See http://osl.iu.edu/research/itl/
  28. // Following the corresponding Copyright notice.
  29. //===========================================================================
  30. //
  31. // Copyright (c) 1998-2001, University of Notre Dame. All rights reserved.
  32. // Redistribution and use in source and binary forms, with or without
  33. // modification, are permitted provided that the following conditions are met:
  34. //
  35. // * Redistributions of source code must retain the above copyright
  36. // notice, this list of conditions and the following disclaimer.
  37. // * Redistributions in binary form must reproduce the above copyright
  38. // notice, this list of conditions and the following disclaimer in the
  39. // documentation and/or other materials provided with the distribution.
  40. // * Neither the name of the University of Notre Dame nor the
  41. // names of its contributors may be used to endorse or promote products
  42. // derived from this software without specific prior written permission.
  43. //
  44. // THIS SOFTWARE IS PROVIDED BY THE TRUSTEES OF INDIANA UNIVERSITY AND
  45. // CONTRIBUTORS ``AS IS'' AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING,
  46. // BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS
  47. // FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE TRUSTEES
  48. // OF INDIANA UNIVERSITY AND CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT,
  49. // INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT
  50. // NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
  51. // DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
  52. // THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
  53. // (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF
  54. // THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
  55. //
  56. //===========================================================================
  57. #ifndef GMM_PRECOND_ILDLT_H
  58. #define GMM_PRECOND_ILDLT_H
  59. /**@file gmm_precond_ildlt.h
  60. @author Andrew Lumsdaine <lums@osl.iu.edu>
  61. @author Lie-Quan Lee <llee@osl.iu.edu>
  62. @author Yves Renard <yves.renard@insa-lyon.fr>
  63. @date June 5, 2003.
  64. @brief Incomplete Level 0 ILDLT Preconditioner.
  65. */
  66. #include "gmm_precond.h"
  67. namespace gmm {
  68. /** Incomplete Level 0 LDLT Preconditioner.
  69. For use with symmetric real or hermitian complex sparse matrices.
  70. Notes: The idea under a concrete Preconditioner such as Incomplete
  71. Cholesky is to create a Preconditioner object to use in iterative
  72. methods.
  73. Y. Renard : Transformed in LDLT for stability reason.
  74. U=LT is stored in csr format. D is stored on the diagonal of U.
  75. */
  76. template <typename Matrix>
  77. class ildlt_precond {
  78. public :
  79. typedef typename linalg_traits<Matrix>::value_type value_type;
  80. typedef typename number_traits<value_type>::magnitude_type magnitude_type;
  81. typedef csr_matrix_ref<value_type *, size_type *, size_type *, 0> tm_type;
  82. tm_type U;
  83. protected :
  84. std::vector<value_type> Tri_val;
  85. std::vector<size_type> Tri_ind, Tri_ptr;
  86. template<typename M> void do_ildlt(const M& A, row_major);
  87. void do_ildlt(const Matrix& A, col_major);
  88. public:
  89. size_type nrows(void) const { return mat_nrows(U); }
  90. size_type ncols(void) const { return mat_ncols(U); }
  91. value_type &D(size_type i) { return Tri_val[Tri_ptr[i]]; }
  92. const value_type &D(size_type i) const { return Tri_val[Tri_ptr[i]]; }
  93. ildlt_precond(void) {}
  94. void build_with(const Matrix& A) {
  95. Tri_ptr.resize(mat_nrows(A)+1);
  96. do_ildlt(A, typename principal_orientation_type<typename
  97. linalg_traits<Matrix>::sub_orientation>::potype());
  98. }
  99. ildlt_precond(const Matrix& A) { build_with(A); }
  100. size_type memsize() const {
  101. return sizeof(*this) +
  102. Tri_val.size() * sizeof(value_type) +
  103. (Tri_ind.size()+Tri_ptr.size()) * sizeof(size_type);
  104. }
  105. };
  106. template <typename Matrix> template<typename M>
  107. void ildlt_precond<Matrix>::do_ildlt(const M& A, row_major) {
  108. typedef typename linalg_traits<Matrix>::storage_type store_type;
  109. typedef value_type T;
  110. typedef typename number_traits<T>::magnitude_type R;
  111. size_type Tri_loc = 0, n = mat_nrows(A), d, g, h, i, j, k;
  112. if (n == 0) return;
  113. T z, zz;
  114. Tri_ptr[0] = 0;
  115. R prec = default_tol(R());
  116. R max_pivot = gmm::abs(A(0,0)) * prec;
  117. for (int count = 0; count < 2; ++count) {
  118. if (count) { Tri_val.resize(Tri_loc); Tri_ind.resize(Tri_loc); }
  119. for (Tri_loc = 0, i = 0; i < n; ++i) {
  120. typedef typename linalg_traits<M>::const_sub_row_type row_type;
  121. row_type row = mat_const_row(A, i);
  122. typename linalg_traits<row_type>::const_iterator
  123. it = vect_const_begin(row), ite = vect_const_end(row);
  124. if (count) { Tri_val[Tri_loc] = T(0); Tri_ind[Tri_loc] = i; }
  125. ++Tri_loc; // diagonal element
  126. for (k = 0; it != ite; ++it, ++k) {
  127. j = index_of_it(it, k, store_type());
  128. if (i == j) {
  129. if (count) Tri_val[Tri_loc-1] = *it;
  130. }
  131. else if (j > i) {
  132. if (count) { Tri_val[Tri_loc] = *it; Tri_ind[Tri_loc]=j; }
  133. ++Tri_loc;
  134. }
  135. }
  136. Tri_ptr[i+1] = Tri_loc;
  137. }
  138. }
  139. if (A(0,0) == T(0)) {
  140. Tri_val[Tri_ptr[0]] = T(1);
  141. GMM_WARNING2("pivot 0 is too small");
  142. }
  143. for (k = 0; k < n; k++) {
  144. d = Tri_ptr[k];
  145. z = T(gmm::real(Tri_val[d])); Tri_val[d] = z;
  146. if (gmm::abs(z) <= max_pivot) {
  147. Tri_val[d] = z = T(1);
  148. GMM_WARNING2("pivot " << k << " is too small [" << gmm::abs(z) << "]");
  149. }
  150. max_pivot = std::max(max_pivot, std::min(gmm::abs(z) * prec, R(1)));
  151. for (i = d + 1; i < Tri_ptr[k+1]; ++i) Tri_val[i] /= z;
  152. for (i = d + 1; i < Tri_ptr[k+1]; ++i) {
  153. zz = gmm::conj(Tri_val[i] * z);
  154. h = Tri_ind[i];
  155. g = i;
  156. for (j = Tri_ptr[h] ; j < Tri_ptr[h+1]; ++j)
  157. for ( ; g < Tri_ptr[k+1] && Tri_ind[g] <= Tri_ind[j]; ++g)
  158. if (Tri_ind[g] == Tri_ind[j])
  159. Tri_val[j] -= zz * Tri_val[g];
  160. }
  161. }
  162. U = tm_type(&(Tri_val[0]), &(Tri_ind[0]), &(Tri_ptr[0]),
  163. n, mat_ncols(A));
  164. }
  165. template <typename Matrix>
  166. void ildlt_precond<Matrix>::do_ildlt(const Matrix& A, col_major)
  167. { do_ildlt(gmm::conjugated(A), row_major()); }
  168. template <typename Matrix, typename V1, typename V2> inline
  169. void mult(const ildlt_precond<Matrix>& P, const V1 &v1, V2 &v2) {
  170. gmm::copy(v1, v2);
  171. gmm::lower_tri_solve(gmm::conjugated(P.U), v2, true);
  172. for (size_type i = 0; i < mat_nrows(P.U); ++i) v2[i] /= P.D(i);
  173. gmm::upper_tri_solve(P.U, v2, true);
  174. }
  175. template <typename Matrix, typename V1, typename V2> inline
  176. void transposed_mult(const ildlt_precond<Matrix>& P,const V1 &v1,V2 &v2)
  177. { mult(P, v1, v2); }
  178. template <typename Matrix, typename V1, typename V2> inline
  179. void left_mult(const ildlt_precond<Matrix>& P, const V1 &v1, V2 &v2) {
  180. copy(v1, v2);
  181. gmm::lower_tri_solve(gmm::conjugated(P.U), v2, true);
  182. for (size_type i = 0; i < mat_nrows(P.U); ++i) v2[i] /= P.D(i);
  183. }
  184. template <typename Matrix, typename V1, typename V2> inline
  185. void right_mult(const ildlt_precond<Matrix>& P, const V1 &v1, V2 &v2)
  186. { copy(v1, v2); gmm::upper_tri_solve(P.U, v2, true); }
  187. template <typename Matrix, typename V1, typename V2> inline
  188. void transposed_left_mult(const ildlt_precond<Matrix>& P, const V1 &v1,
  189. V2 &v2) {
  190. copy(v1, v2);
  191. gmm::upper_tri_solve(P.U, v2, true);
  192. for (size_type i = 0; i < mat_nrows(P.U); ++i) v2[i] /= P.D(i);
  193. }
  194. template <typename Matrix, typename V1, typename V2> inline
  195. void transposed_right_mult(const ildlt_precond<Matrix>& P, const V1 &v1,
  196. V2 &v2)
  197. { copy(v1, v2); gmm::lower_tri_solve(gmm::conjugated(P.U), v2, true); }
  198. // for compatibility with old versions
  199. template <typename Matrix>
  200. struct cholesky_precond : public ildlt_precond<Matrix> {
  201. cholesky_precond(const Matrix& A) : ildlt_precond<Matrix>(A) {}
  202. cholesky_precond(void) {}
  203. } IS_DEPRECATED;
  204. template <typename Matrix, typename V1, typename V2> inline
  205. void mult(const cholesky_precond<Matrix>& P, const V1 &v1, V2 &v2) {
  206. gmm::copy(v1, v2);
  207. gmm::lower_tri_solve(gmm::conjugated(P.U), v2, true);
  208. for (size_type i = 0; i < mat_nrows(P.U); ++i) v2[i] /= P.D(i);
  209. gmm::upper_tri_solve(P.U, v2, true);
  210. }
  211. template <typename Matrix, typename V1, typename V2> inline
  212. void transposed_mult(const cholesky_precond<Matrix>& P,const V1 &v1,V2 &v2)
  213. { mult(P, v1, v2); }
  214. template <typename Matrix, typename V1, typename V2> inline
  215. void left_mult(const cholesky_precond<Matrix>& P, const V1 &v1, V2 &v2) {
  216. copy(v1, v2);
  217. gmm::lower_tri_solve(gmm::conjugated(P.U), v2, true);
  218. for (size_type i = 0; i < mat_nrows(P.U); ++i) v2[i] /= P.D(i);
  219. }
  220. template <typename Matrix, typename V1, typename V2> inline
  221. void right_mult(const cholesky_precond<Matrix>& P, const V1 &v1, V2 &v2)
  222. { copy(v1, v2); gmm::upper_tri_solve(P.U, v2, true); }
  223. template <typename Matrix, typename V1, typename V2> inline
  224. void transposed_left_mult(const cholesky_precond<Matrix>& P, const V1 &v1,
  225. V2 &v2) {
  226. copy(v1, v2);
  227. gmm::upper_tri_solve(P.U, v2, true);
  228. for (size_type i = 0; i < mat_nrows(P.U); ++i) v2[i] /= P.D(i);
  229. }
  230. template <typename Matrix, typename V1, typename V2> inline
  231. void transposed_right_mult(const cholesky_precond<Matrix>& P, const V1 &v1,
  232. V2 &v2)
  233. { copy(v1, v2); gmm::lower_tri_solve(gmm::conjugated(P.U), v2, true); }
  234. }
  235. #endif