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#include <boost/container/flat_set.hpp>
#include <iostream>
#include <algorithm>
#include "src/storage/BitVector.h"
#include "src/exceptions/InvalidArgumentException.h"
#include "src/exceptions/OutOfRangeException.h"
#include "src/utility/OsDetection.h"
#include "src/utility/Hash.h"
#include "src/utility/macros.h"
#include <bitset>
#ifdef STORM_DEV
#define ASSERT_BITVECTOR
#endif
namespace storm {
namespace storage {
BitVector::const_iterator::const_iterator(uint64_t const* dataPtr, uint_fast64_t startIndex, uint_fast64_t endIndex, bool setOnFirstBit) : dataPtr(dataPtr), endIndex(endIndex) {
if (setOnFirstBit) {
// Set the index of the first set bit in the vector.
currentIndex = getNextSetIndex(dataPtr, startIndex, endIndex);
} else {
currentIndex = startIndex;
}
}
BitVector::const_iterator::const_iterator(const_iterator const& other) : dataPtr(other.dataPtr), currentIndex(other.currentIndex), endIndex(other.endIndex) {
// Intentionally left empty.
}
BitVector::const_iterator& BitVector::const_iterator::operator=(const_iterator const& other) {
// Only assign contents if the source and target are not the same.
if (this != &other) {
dataPtr = other.dataPtr;
currentIndex = other.currentIndex;
endIndex = other.endIndex;
}
return *this;
}
BitVector::const_iterator& BitVector::const_iterator::operator++() {
currentIndex = getNextSetIndex(dataPtr, ++currentIndex, endIndex);
return *this;
}
BitVector::const_iterator& BitVector::const_iterator::operator+=(size_t n) {
for(size_t i = 0; i < n; ++i) {
currentIndex = getNextSetIndex(dataPtr, ++currentIndex, endIndex);
}
return *this;
}
uint_fast64_t BitVector::const_iterator::operator*() const {
return currentIndex;
}
bool BitVector::const_iterator::operator!=(const_iterator const& other) const {
return currentIndex != other.currentIndex;
}
bool BitVector::const_iterator::operator==(const_iterator const& other) const {
return currentIndex == other.currentIndex;
}
BitVector::BitVector() : bitCount(0), buckets(nullptr) {
// Intentionally left empty.
}
BitVector::BitVector(uint_fast64_t length, bool init) : bitCount(length), buckets(nullptr) {
// Compute the correct number of buckets needed to store the given number of bits.
uint_fast64_t bucketCount = length >> 6;
if ((length & mod64mask) != 0) {
++bucketCount;
}
// Initialize the storage with the required values.
if (init) {
buckets = new uint64_t[bucketCount];
std::fill_n(buckets, bucketCount, -1ull);
truncateLastBucket();
} else {
buckets = new uint64_t[bucketCount]();
}
}
BitVector::~BitVector() {
if (buckets != nullptr) {
delete buckets;
}
}
template<typename InputIterator>
BitVector::BitVector(uint_fast64_t length, InputIterator begin, InputIterator end) : BitVector(length) {
set(begin, end);
}
BitVector::BitVector(uint_fast64_t length, std::vector<uint_fast64_t> setEntries) : BitVector(length, setEntries.begin(), setEntries.end()) {
// Intentionally left empty.
}
BitVector::BitVector(uint_fast64_t bucketCount, uint_fast64_t bitCount) : bitCount(bitCount), buckets(nullptr) {
STORM_LOG_ASSERT((bucketCount << 6) == bitCount, "Bit count does not match number of buckets.");
buckets = new uint64_t[bucketCount]();
}
BitVector::BitVector(BitVector const& other) : bitCount(other.bitCount), buckets(nullptr) {
buckets = new uint64_t[other.bucketCount()];
std::copy_n(other.buckets, other.bucketCount(), buckets);
}
BitVector& BitVector::operator=(BitVector const& other) {
// Only perform the assignment if the source and target are not identical.
if (this != &other) {
bitCount = other.bitCount;
buckets = new uint64_t[other.bucketCount()];
std::copy_n(other.buckets, other.bucketCount(), buckets);
}
return *this;
}
bool BitVector::operator<(BitVector const& other) const {
if (this->size() < other.size()) {
return true;
} else if (this->size() > other.size()) {
return false;
}
uint64_t* first1 = this->buckets;
uint64_t* last1 = this->buckets + this->bucketCount();
uint64_t* first2 = other.buckets;
for (; first1 != last1; ++first1, ++first2) {
if (*first1 < *first2) {
return true;
} else if (*first1 > *first2) {
return false;
}
}
return false;
}
BitVector::BitVector(BitVector&& other) : bitCount(other.bitCount), buckets(other.buckets) {
other.bitCount = 0;
other.buckets = nullptr;
}
BitVector& BitVector::operator=(BitVector&& other) {
// Only perform the assignment if the source and target are not identical.
if (this != &other) {
bitCount = other.bitCount;
this->buckets = other.buckets;
other.buckets = nullptr;
}
return *this;
}
bool BitVector::operator==(BitVector const& other) const {
// If the lengths of the vectors do not match, they are considered unequal.
if (this->bitCount != other.bitCount) return false;
// If the lengths match, we compare the buckets one by one.
return std::equal(this->buckets, this->buckets + this->bucketCount(), other.buckets);
}
bool BitVector::operator!=(BitVector const& other) const {
return !(*this == other);
}
void BitVector::set(uint_fast64_t index, bool value) {
STORM_LOG_ASSERT(index < bitCount, "Invalid call to BitVector::set: written index " << index << " out of bounds.");
uint64_t bucket = index >> 6;
uint64_t mask = 1ull << (63 - (index & mod64mask));
if (value) {
buckets[bucket] |= mask;
} else {
buckets[bucket] &= ~mask;
}
}
template<typename InputIterator>
void BitVector::set(InputIterator begin, InputIterator end) {
for (InputIterator it = begin; it != end; ++it) {
this->set(*it);
}
}
bool BitVector::operator[](uint_fast64_t index) const {
uint64_t bucket = index >> 6;
uint64_t mask = 1ull << (63 - (index & mod64mask));
return (this->buckets[bucket] & mask) == mask;
}
bool BitVector::get(uint_fast64_t index) const {
STORM_LOG_ASSERT(index < bitCount, "Invalid call to BitVector::get: read index " << index << " out of bounds.");
return (*this)[index];
}
void BitVector::resize(uint_fast64_t newLength, bool init) {
if (newLength > bitCount) {
uint_fast64_t newBucketCount = newLength >> 6;
if ((newLength & mod64mask) != 0) {
++newBucketCount;
}
if (newBucketCount > this->bucketCount()) {
uint64_t* newBuckets = new uint64_t[newBucketCount];
std::copy_n(buckets, this->bucketCount(), newBuckets);
if (init) {
newBuckets[this->bucketCount() - 1] |= ((1ull << (64 - (bitCount & mod64mask))) - 1ull);
std::fill_n(newBuckets + this->bucketCount(), newBucketCount - this->bucketCount(), -1ull);
} else {
std::fill_n(newBuckets + this->bucketCount(), newBucketCount - this->bucketCount(), 0);
}
if (buckets != nullptr) {
delete buckets;
}
buckets = newBuckets;
bitCount = newLength;
} else {
// If the underlying storage does not need to grow, we have to insert the missing bits.
if (init) {
buckets[this->bucketCount() - 1] |= ((1ull << (64 - (bitCount & mod64mask))) - 1ull);
}
bitCount = newLength;
}
truncateLastBucket();
} else {
uint_fast64_t newBucketCount = newLength >> 6;
if ((newLength & mod64mask) != 0) {
++newBucketCount;
}
// If the number of buckets needs to be reduced, we resize it now. Otherwise, we can just truncate the
// last bucket.
if (newBucketCount < this->bucketCount()) {
uint64_t* newBuckets = new uint64_t[newBucketCount];
std::copy_n(buckets, newBucketCount, newBuckets);
if (buckets != nullptr) {
delete buckets;
}
buckets = newBuckets;
bitCount = newLength;
}
bitCount = newLength;
truncateLastBucket();
}
}
BitVector BitVector::operator&(BitVector const& other) const {
STORM_LOG_ASSERT(bitCount == other.bitCount, "Length of the bit vectors does not match.");
BitVector result(bitCount);
std::transform(this->buckets, this->buckets + this->bucketCount(), other.buckets, result.buckets, [] (uint64_t const& a, uint64_t const& b) { return a & b; });
return result;
}
BitVector& BitVector::operator&=(BitVector const& other) {
STORM_LOG_ASSERT(bitCount == other.bitCount, "Length of the bit vectors does not match.");
std::transform(this->buckets, this->buckets + this->bucketCount(), other.buckets, this->buckets, [] (uint64_t const& a, uint64_t const& b) { return a & b; });
return *this;
}
BitVector BitVector::operator|(BitVector const& other) const {
STORM_LOG_ASSERT(bitCount == other.bitCount, "Length of the bit vectors does not match.");
BitVector result(bitCount);
std::transform(this->buckets, this->buckets + this->bucketCount(), other.buckets, result.buckets, [] (uint64_t const& a, uint64_t const& b) { return a | b; });
return result;
}
BitVector& BitVector::operator|=(BitVector const& other) {
STORM_LOG_ASSERT(bitCount == other.bitCount, "Length of the bit vectors does not match.");
std::transform(this->buckets, this->buckets + this->bucketCount(), other.buckets, this->buckets, [] (uint64_t const& a, uint64_t const& b) { return a | b; });
return *this;
}
BitVector BitVector::operator^(BitVector const& other) const {
STORM_LOG_ASSERT(bitCount == other.bitCount, "Length of the bit vectors does not match.");
BitVector result(bitCount);
std::transform(this->buckets, this->buckets + this->bucketCount(), other.buckets, result.buckets, [] (uint64_t const& a, uint64_t const& b) { return a ^ b; });
result.truncateLastBucket();
return result;
}
BitVector BitVector::operator%(BitVector const& filter) const {
STORM_LOG_ASSERT(bitCount == filter.bitCount, "Length of the bit vectors does not match.");
BitVector result(filter.getNumberOfSetBits());
// If the current bit vector has not too many elements compared to the given bit vector we prefer iterating
// over its elements.
if (filter.getNumberOfSetBits() / 10 < this->getNumberOfSetBits()) {
uint_fast64_t position = 0;
for (auto bit : filter) {
if ((*this)[bit]) {
result.set(position);
}
++position;
}
} else {
// If the given bit vector had much fewer elements, we iterate over its elements and accept calling the
// more costly operation getNumberOfSetBitsBeforeIndex on the current bit vector.
for (auto bit : (*this)) {
if (filter[bit]) {
result.set(filter.getNumberOfSetBitsBeforeIndex(bit));
}
}
}
return result;
}
BitVector BitVector::operator~() const {
BitVector result(this->bitCount);
std::transform(this->buckets, this->buckets + this->bucketCount(), result.buckets, [] (uint64_t const& a) { return ~a; });
result.truncateLastBucket();
return result;
}
void BitVector::complement() {
std::transform(this->buckets, this->buckets + this->bucketCount(), this->buckets, [] (uint64_t const& a) { return ~a; });
truncateLastBucket();
}
BitVector BitVector::implies(BitVector const& other) const {
STORM_LOG_ASSERT(bitCount == other.bitCount, "Length of the bit vectors does not match.");
BitVector result(bitCount);
std::transform(this->buckets, this->buckets + this->bucketCount(), other.buckets, result.buckets, [] (uint64_t const& a, uint64_t const& b) { return (~a | b); });
result.truncateLastBucket();
return result;
}
bool BitVector::isSubsetOf(BitVector const& other) const {
STORM_LOG_ASSERT(bitCount == other.bitCount, "Length of the bit vectors does not match.");
uint64_t const* it1 = buckets;
uint64_t const* ite1 = buckets + bucketCount();
uint64_t const* it2 = other.buckets;
for (; it1 != ite1; ++it1, ++it2) {
if ((*it1 & *it2) != *it1) {
return false;
}
}
return true;
}
bool BitVector::isDisjointFrom(BitVector const& other) const {
STORM_LOG_ASSERT(bitCount == other.bitCount, "Length of the bit vectors does not match.");
uint64_t const* it1 = buckets;
uint64_t const* ite1 = buckets + bucketCount();
uint64_t const* it2 = other.buckets;
for (; it1 != ite1; ++it1, ++it2) {
if ((*it1 & *it2) != 0) {
return false;
}
}
return true;
}
bool BitVector::matches(uint_fast64_t bitIndex, BitVector const& other) const {
STORM_LOG_ASSERT((bitIndex & mod64mask) == 0, "Bit index must be a multiple of 64.");
STORM_LOG_ASSERT(other.size() <= this->size() - bitIndex, "Bit vector argument is too long.");
// Compute the first bucket that needs to be checked and the number of buckets.
uint64_t index = bitIndex >> 6;
uint64_t const* first1 = buckets + index;
uint64_t const* first2 = other.buckets;
uint64_t const* last2 = other.buckets + other.bucketCount();
for (; first2 != last2; ++first1, ++first2) {
if (*first1 != *first2) {
return false;
}
}
return true;
}
void BitVector::set(uint_fast64_t bitIndex, BitVector const& other) {
STORM_LOG_ASSERT((bitIndex & mod64mask) == 0, "Bit index must be a multiple of 64.");
STORM_LOG_ASSERT(other.size() <= this->size() - bitIndex, "Bit vector argument is too long.");
// Compute the first bucket that needs to be checked and the number of buckets.
uint64_t index = bitIndex >> 6;
uint64_t* first1 = buckets + index;
uint64_t const* first2 = other.buckets;
uint64_t const* last2 = other.buckets + other.bucketCount();
for (; first2 != last2; ++first1, ++first2) {
*first1 = *first2;
}
}
storm::storage::BitVector BitVector::get(uint_fast64_t bitIndex, uint_fast64_t numberOfBits) const {
uint64_t numberOfBuckets = numberOfBits >> 6;
uint64_t index = bitIndex >> 6;
STORM_LOG_ASSERT(index + numberOfBuckets <= this->bucketCount(), "Argument is out-of-range.");
storm::storage::BitVector result(numberOfBuckets, numberOfBits);
std::copy(this->buckets + index, this->buckets + index + numberOfBuckets, result.buckets);
result.truncateLastBucket();
return result;
}
uint_fast64_t BitVector::getAsInt(uint_fast64_t bitIndex, uint_fast64_t numberOfBits) const {
STORM_LOG_ASSERT(numberOfBits <= 64, "Number of bits must be <= 64.");
uint64_t bucket = bitIndex >> 6;
uint64_t bitIndexInBucket = bitIndex & mod64mask;
uint64_t mask;
if (bitIndexInBucket == 0) {
mask = -1ull;
} else {
mask = (1ull << (64 - bitIndexInBucket)) - 1ull;
}
if (bitIndexInBucket + numberOfBits < 64) {
// If the value stops before the end of the bucket, we need to erase some lower bits.
mask &= ~((1ull << (64 - (bitIndexInBucket + numberOfBits))) - 1ull);
return (buckets[bucket] & mask) >> (64 - (bitIndexInBucket + numberOfBits));
} else if (bitIndexInBucket + numberOfBits > 64) {
// In this case, the integer "crosses" the bucket line.
uint64_t result = (buckets[bucket] & mask);
++bucket;
// Compute the remaining number of bits.
numberOfBits -= (64 - bitIndexInBucket);
// Shift the intermediate result to the right location.
result <<= numberOfBits;
// Strip away everything from the second bucket that is beyond the final index and add it to the
// intermediate result.
mask = ~((1ull << (64 - numberOfBits)) - 1ull);
uint64_t lowerBits = buckets[bucket] & mask;
result |= (lowerBits >> (64 - numberOfBits));
return result;
} else {
// In this case, it suffices to take the current mask.
return buckets[bucket] & mask;
}
}
uint_fast64_t BitVector::getTwoBitsAligned(uint_fast64_t bitIndex) const {
// Check whether it is aligned.
STORM_LOG_ASSERT(bitIndex % 64 != 63, "Bits not aligned.");
uint64_t bucket = bitIndex >> 6;
uint64_t bitIndexInBucket = bitIndex & mod64mask;
uint64_t mask;
if (bitIndexInBucket == 0) {
mask = -1ull;
} else {
mask = (1ull << (64 - bitIndexInBucket)) - 1ull;
}
if (bitIndexInBucket < 62) { // bitIndexInBucket + 2 < 64
// If the value stops before the end of the bucket, we need to erase some lower bits.
mask &= ~((1ull << (62 - (bitIndexInBucket))) - 1ull);
return (buckets[bucket] & mask) >> (62 - bitIndexInBucket);
} else {
// In this case, it suffices to take the current mask.
return buckets[bucket] & mask;
}
}
void BitVector::setFromInt(uint_fast64_t bitIndex, uint_fast64_t numberOfBits, uint64_t value) {
STORM_LOG_ASSERT(numberOfBits <= 64, "Number of bits must be <= 64.");
STORM_LOG_ASSERT(numberOfBits == 64 || (value >> numberOfBits) == 0, "Integer value too large to fit in the given number of bits.");
uint64_t bucket = bitIndex >> 6;
uint64_t bitIndexInBucket = bitIndex & mod64mask;
uint64_t mask;
if (bitIndexInBucket == 0) {
mask = -1ull;
} else {
mask = (1ull << (64 - bitIndexInBucket)) - 1ull;
}
if (bitIndexInBucket + numberOfBits < 64) {
// If the value stops before the end of the bucket, we need to erase some lower bits.
mask &= ~((1ull << (64 - (bitIndexInBucket + numberOfBits))) - 1ull);
buckets[bucket] = (buckets[bucket] & ~mask) | (value << (64 - (bitIndexInBucket + numberOfBits)));
} else if (bitIndexInBucket + numberOfBits > 64) {
// Write the part of the value that falls into the first bucket.
buckets[bucket] = (buckets[bucket] & ~mask) | (value >> (numberOfBits + (bitIndexInBucket - 64)));
++bucket;
// Compute the remaining number of bits.
numberOfBits -= (64 - bitIndexInBucket);
// Shift the bits of the value such that the already set bits disappear.
value <<= (64 - numberOfBits);
// Put the remaining bits in their place.
mask = ((1ull << (64 - numberOfBits)) - 1ull);
buckets[bucket] = (buckets[bucket] & mask) | value;
} else {
buckets[bucket] = (buckets[bucket] & ~mask) | value;
}
}
bool BitVector::empty() const {
uint64_t* last = buckets + bucketCount();
uint64_t* it = std::find_if(buckets, last, [] (uint64_t const& a) { return a != 0; });
return it == last;
}
bool BitVector::full() const {
// Check that all buckets except the last one have all bits set.
uint64_t* last = buckets + bucketCount() - 1;
for (uint64_t const* it = buckets; it < last; ++it) {
if (*it != -1ull) {
return false;
}
}
// Now check whether the relevant bits are set in the last bucket.
uint64_t mask = ~((1ull << (64 - (bitCount & mod64mask))) - 1ull);
if ((*last & mask) != mask) {
return false;
}
return true;
}
void BitVector::clear() {
std::fill_n(buckets, this->bucketCount(), 0);
}
uint_fast64_t BitVector::getNumberOfSetBits() const {
return getNumberOfSetBitsBeforeIndex(bitCount);
}
uint_fast64_t BitVector::getNumberOfSetBitsBeforeIndex(uint_fast64_t index) const {
uint_fast64_t result = 0;
// First, count all full buckets.
uint_fast64_t bucket = index >> 6;
for (uint_fast64_t i = 0; i < bucket; ++i) {
// Check how to determine the number of set bits in a bucket
#ifdef WINDOWS
#include <nmmintrin.h>
// If the target machine does not support SSE4, this will fail.
result += _mm_popcnt_u64(bucketVector[i]);
#elif defined STORM_HAS_BUILTIN_POPCOUNT
result += __builtin_popcountll(buckets[i]);
#else
uint_fast32_t cnt;
uint_fast64_t bitset = buckets[i];
for (cnt = 0; bitset; cnt++) {
bitset &= bitset - 1;
}
result += cnt;
#endif
}
// Now check if we have to count part of a bucket.
uint64_t tmp = index & mod64mask;
if (tmp != 0) {
tmp = ~((1ll << (64 - (tmp & mod64mask))) - 1ll);
tmp &= buckets[bucket];
// Check how to determine the number of set bits in a bucket
#ifdef WINDOWS
#include <nmmintrin.h>
// If the target machine does not support SSE4, this will fail.
result += _mm_popcnt_u64(tmp);
#elif defined STORM_HAS_BUILTIN_POPCOUNT
result += __builtin_popcountll(tmp);
#else
uint_fast32_t cnt;
uint64_t bitset = tmp;
for (cnt = 0; bitset; cnt++) {
bitset &= bitset - 1;
}
result += cnt;
#endif
}
return result;
}
std::vector<uint_fast64_t> BitVector::getNumberOfSetBitsBeforeIndices() const {
std::vector<uint_fast64_t> bitsSetBeforeIndices;
bitsSetBeforeIndices.reserve(this->size());
uint_fast64_t lastIndex = 0;
uint_fast64_t currentNumberOfSetBits = 0;
for (auto index : *this) {
while (lastIndex <= index) {
bitsSetBeforeIndices.push_back(currentNumberOfSetBits);
++lastIndex;
}
++currentNumberOfSetBits;
}
return bitsSetBeforeIndices;
}
size_t BitVector::size() const {
return static_cast<size_t> (bitCount);
}
std::size_t BitVector::getSizeInBytes() const {
return sizeof (*this) + sizeof (uint64_t) * bucketCount();
}
BitVector::const_iterator BitVector::begin() const {
return const_iterator(buckets, 0, bitCount);
}
BitVector::const_iterator BitVector::end() const {
return const_iterator(buckets, bitCount, bitCount, false);
}
uint_fast64_t BitVector::getNextSetIndex(uint_fast64_t startingIndex) const {
return getNextSetIndex(buckets, startingIndex, bitCount);
}
uint_fast64_t BitVector::getNextSetIndex(uint64_t const* dataPtr, uint_fast64_t startingIndex, uint_fast64_t endIndex) {
uint_fast8_t currentBitInByte = startingIndex & mod64mask;
uint64_t const* bucketIt = dataPtr + (startingIndex >> 6);
startingIndex = (startingIndex >> 6 << 6);
uint64_t mask;
if (currentBitInByte == 0) {
mask = -1ull;
} else {
mask = (1ull << (64 - currentBitInByte)) - 1ull;
}
while (startingIndex < endIndex) {
// Compute the remaining bucket content.
uint64_t remainingInBucket = *bucketIt & mask;
// Check if there is at least one bit in the remainder of the bucket that is set to true.
if (remainingInBucket != 0) {
// As long as the current bit is not set, move the current bit.
while ((remainingInBucket & (1ull << (63 - currentBitInByte))) == 0) {
++currentBitInByte;
}
// Only return the index of the set bit if we are still in the valid range.
if (startingIndex + currentBitInByte < endIndex) {
return startingIndex + currentBitInByte;
} else {
return endIndex;
}
}
// Advance to the next bucket.
startingIndex += 64;
++bucketIt;
mask = -1ull;
currentBitInByte = 0;
}
return endIndex;
}
storm::storage::BitVector BitVector::getAsBitVector(uint_fast64_t start, uint_fast64_t length) const {
STORM_LOG_ASSERT(start + length <= bitCount, "Invalid range.");
#ifdef ASSERT_BITVECTOR
BitVector original(*this);
#endif
storm::storage::BitVector result(length, false);
uint_fast64_t offset = start % 64;
uint64_t* getBucket = buckets + (start / 64);
uint64_t* insertBucket = result.buckets;
uint_fast64_t getValue;
uint_fast64_t writeValue = 0;
uint_fast64_t noBits = 0;
if (offset == 0) {
// Copy complete buckets
for ( ; noBits + 64 <= length; ++getBucket, ++insertBucket, noBits += 64) {
*insertBucket = *getBucket;
}
} else {
//Get first bits up until next bucket
getValue = *getBucket;
writeValue = (getValue << offset);
noBits += (64-offset);
++getBucket;
//Get complete buckets
for ( ; noBits + 64 <= length; ++getBucket, ++insertBucket, noBits += 64) {
getValue = *getBucket;
// Get bits till write bucket is full
writeValue |= (getValue >> (64-offset));
*insertBucket = writeValue;
// Get bits up until next bucket
writeValue = (getValue << offset);
}
}
// Write last bits
uint_fast64_t remainingBits = length - noBits;
STORM_LOG_ASSERT(getBucket != buckets + bucketCount(), "Bucket index incorrect.");
// Get remaining bits
getValue = (*getBucket >> (64-remainingBits)) << (64-remainingBits);
STORM_LOG_ASSERT(remainingBits < 64, "Too many remaining bits.");
// Write bucket
STORM_LOG_ASSERT(insertBucket != result.buckets + result.bucketCount(), "Bucket index incorrect.");
if (offset == 0) {
*insertBucket = getValue;
} else {
writeValue |= getValue >> (64-offset);
*insertBucket = writeValue;
if (remainingBits > offset) {
// Write last bits in new value
writeValue = (getValue << offset);
++insertBucket;
STORM_LOG_ASSERT(insertBucket != result.buckets + result.bucketCount(), "Bucket index incorrect.");
*insertBucket = writeValue;
}
}
#ifdef ASSERT_BITVECTOR
// Check correctness of getter
for (uint_fast64_t i = 0; i < length; ++i) {
if (result.get(i) != get(start + i)) {
STORM_LOG_ERROR("Getting of bits not correct for index " << i);
STORM_LOG_ERROR("Getting from " << start << " with length " << length);
std::stringstream stream;
printBits(stream);
stream << std::endl;
result.printBits(stream);
STORM_LOG_ERROR(stream.str());
STORM_LOG_ASSERT(false, "Getting of bits not correct.");
}
}
for (uint_fast64_t i = 0; i < bitCount; ++i) {
if (i < start || i >= start+length) {
if (original.get(i) != get(i)) {
STORM_LOG_ERROR("Getting did change bitvector at index " << i);
STORM_LOG_ERROR("Getting from " << start << " with length " << length);
std::stringstream stream;
printBits(stream);
stream << std::endl;
original.printBits(stream);
STORM_LOG_ERROR(stream.str());
STORM_LOG_ASSERT(false, "Getting of bits not correct.");
}
}
}
#endif
return result;
}
void BitVector::setFromBitVector(uint_fast64_t start, BitVector const& other) {
#ifdef ASSERT_BITVECTOR
BitVector original(*this);
#endif
STORM_LOG_ASSERT(start + other.bitCount <= bitCount, "Range invalid.");
uint_fast64_t offset = start % 64;
uint64_t* insertBucket = buckets + (start / 64);
uint64_t* getBucket = other.buckets;
uint_fast64_t getValue;
uint_fast64_t writeValue = 0;
uint_fast64_t noBits = 0;
if (offset == 0) {
// Copy complete buckets
for ( ; noBits + 64 <= other.bitCount; ++insertBucket, ++getBucket, noBits += 64) {
*insertBucket = *getBucket;
}
} else {
//Get first bits up until next bucket
getValue = *getBucket;
writeValue = (*insertBucket >> (64-offset)) << (64-offset);
writeValue |= (getValue >> offset);
*insertBucket = writeValue;
noBits += (64-offset);
++insertBucket;
//Get complete buckets
for ( ; noBits + 64 <= other.bitCount; ++insertBucket, noBits += 64) {
// Get all remaining bits from other bucket
writeValue = getValue << (64-offset);
// Get bits from next bucket
++getBucket;
getValue = *getBucket;
writeValue |= getValue >> offset;
*insertBucket = writeValue;
}
}
// Write last bits
uint_fast64_t remainingBits = other.bitCount - noBits;
STORM_LOG_ASSERT(remainingBits < 64, "Too many remaining bits.");
STORM_LOG_ASSERT(insertBucket != buckets + bucketCount(), "Bucket index incorrect.");
STORM_LOG_ASSERT(getBucket != other.buckets + other.bucketCount(), "Bucket index incorrect.");
// Get remaining bits of bucket
getValue = *getBucket;
if (offset > 0) {
getValue = getValue << (64-offset);
}
// Get unchanged part of bucket
writeValue = (*insertBucket << remainingBits) >> remainingBits;
if (remainingBits > offset && offset > 0) {
// Remaining bits do not come from one bucket -> consider next bucket
++getBucket;
STORM_LOG_ASSERT(getBucket != other.buckets + other.bucketCount(), "Bucket index incorrect.");
getValue |= *getBucket >> offset;
}
// Write completely
writeValue |= getValue;
*insertBucket = writeValue;
#ifdef ASSERT_BITVECTOR
// Check correctness of setter
for (uint_fast64_t i = 0; i < other.bitCount; ++i) {
if (other.get(i) != get(start + i)) {
STORM_LOG_ERROR("Setting of bits not correct for index " << i);
STORM_LOG_ERROR("Setting from " << start << " with length " << other.bitCount);
std::stringstream stream;
printBits(stream);
stream << std::endl;
other.printBits(stream);
STORM_LOG_ERROR(stream.str());
STORM_LOG_ASSERT(false, "Setting of bits not correct.");
}
}
for (uint_fast64_t i = 0; i < bitCount; ++i) {
if (i < start || i >= start+other.bitCount) {
if (original.get(i) != get(i)) {
STORM_LOG_ERROR("Setting did change bitvector at index " << i);
STORM_LOG_ERROR("Setting from " << start << " with length " << other.bitCount);
std::stringstream stream;
printBits(stream);
stream << std::endl;
original.printBits(stream);
STORM_LOG_ERROR(stream.str());
STORM_LOG_ASSERT(false, "Setting of bits not correct.");
}
}
}
#endif
}
bool BitVector::compareAndSwap(uint_fast64_t start1, uint_fast64_t start2, uint_fast64_t length) {
if (length < 64) {
// Just use one number
uint_fast64_t elem1 = getAsInt(start1, length);
uint_fast64_t elem2 = getAsInt(start2, length);
if (elem1 < elem2) {
// Swap elements
setFromInt(start1, length, elem2);
setFromInt(start2, length, elem1);
return true;
}
return false;
} else {
// Use bit vectors
BitVector elem1 = getAsBitVector(start1, length);
BitVector elem2 = getAsBitVector(start2, length);
if (!(elem1 < elem2)) {
// Elements already sorted
#ifdef ASSERT_BITVECTOR
// Check that sorted
for (uint_fast64_t i = 0; i < length; ++i) {
if (get(start1 + i) > get(start2 + i)) {
break;
}
STORM_LOG_ASSERT(get(start1 + i) >= get(start2 + i), "Bit vector not sorted for indices " << start1+i << " and " << start2+i);
}
#endif
return false;
}
#ifdef ASSERT_BITVECTOR
BitVector check(*this);
#endif
// Swap elements
setFromBitVector(start1, elem2);
setFromBitVector(start2, elem1);
#ifdef ASSERT_BITVECTOR
// Check correctness of swapping
bool tmp;
for (uint_fast64_t i = 0; i < length; ++i) {
tmp = check.get(i + start1);
check.set(i + start1, check.get(i + start2));
check.set(i + start2, tmp);
}
STORM_LOG_ASSERT(*this == check, "Swapping not correct");
// Check that sorted
for (uint_fast64_t i = 0; i < length; ++i) {
if (get(start1 + i) > get(start2 + i)) {
break;
}
STORM_LOG_ASSERT(get(start1 + i) >= get(start2 + i), "Bit vector not sorted for indices " << start1+i << " and " << start2+i);
}
#endif
return true;
}
}
void BitVector::truncateLastBucket() {
if ((bitCount & mod64mask) != 0) {
buckets[bucketCount() - 1] &= ~((1ll << (64 - (bitCount & mod64mask))) - 1ll);
}
}
size_t BitVector::bucketCount() const {
size_t result = (bitCount >> 6);
if ((bitCount & mod64mask) != 0) {
++result;
}
return result;
}
std::ostream& operator<<(std::ostream& out, BitVector const& bitvector) {
out << "bit vector(" << bitvector.getNumberOfSetBits() << "/" << bitvector.bitCount << ") [";
for (auto index : bitvector) {
out << index << " ";
}
out << "]";
return out;
}
void BitVector::printBits(std::ostream& out) const {
out << "bit vector(" << getNumberOfSetBits() << "/" << bitCount << ") ";
uint_fast64_t index = 0;
for ( ; index * 64 + 64 <= bitCount; ++index) {
std::bitset<64> tmp(buckets[index]);
out << tmp << "|";
}
// Print last bits
if (index * 64 < bitCount) {
STORM_LOG_ASSERT(index == bucketCount() - 1, "Not last bucket.");
std::bitset<64> tmp(buckets[index]);
for (size_t i = 0; i + index * 64 < bitCount; ++i) {
// Bits are counted from rightmost in bitset
out << tmp[63-i];
}
}
out << std::endl;
}
std::size_t NonZeroBitVectorHash::operator()(storm::storage::BitVector const& bitvector) const {
STORM_LOG_ASSERT(bitvector.size() > 0, "Cannot hash bit vector of zero size.");
std::size_t result = 0;
for (uint_fast64_t index = 0; index < bitvector.bucketCount(); ++index) {
result ^= result << 3;
result ^= result >> bitvector.getAsInt(index << 6, 5);
}
// Erase the last bit and add one to definitely make this hash value non-zero.
result &= ~1ull;
result += 1;
return result;
}
// All necessary explicit template instantiations.
template BitVector::BitVector(uint_fast64_t length, std::vector<uint_fast64_t>::iterator begin, std::vector<uint_fast64_t>::iterator end);
template BitVector::BitVector(uint_fast64_t length, std::vector<uint_fast64_t>::const_iterator begin, std::vector<uint_fast64_t>::const_iterator end);
template BitVector::BitVector(uint_fast64_t length, boost::container::flat_set<uint_fast64_t>::iterator begin, boost::container::flat_set<uint_fast64_t>::iterator end);
template BitVector::BitVector(uint_fast64_t length, boost::container::flat_set<uint_fast64_t>::const_iterator begin, boost::container::flat_set<uint_fast64_t>::const_iterator end);
template void BitVector::set(std::vector<uint_fast64_t>::iterator begin, std::vector<uint_fast64_t>::iterator end);
template void BitVector::set(std::vector<uint_fast64_t>::const_iterator begin, std::vector<uint_fast64_t>::const_iterator end);
template void BitVector::set(boost::container::flat_set<uint_fast64_t>::iterator begin, boost::container::flat_set<uint_fast64_t>::iterator end);
template void BitVector::set(boost::container::flat_set<uint_fast64_t>::const_iterator begin, boost::container::flat_set<uint_fast64_t>::const_iterator end);
}
}
namespace std {
std::size_t hash<storm::storage::BitVector>::operator()(storm::storage::BitVector const& bitvector) const {
return boost::hash_range(bitvector.buckets, bitvector.buckets + bitvector.bucketCount());
}
}