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some fixes related to introduction of environments

tempestpy_adaptions
dehnert 7 years ago
parent
e0b5fa51c4
commit
382bc61d6b
2 changed files with 27 additions and 28 deletions
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  1. 47
      src/storm/modelchecker/csl/helper/SparseMarkovAutomatonCslHelper.cpp
  2. 8
      src/storm/modelchecker/csl/helper/SparseMarkovAutomatonCslHelper.h

47
src/storm/modelchecker/csl/helper/SparseMarkovAutomatonCslHelper.cpp
View File

@ -158,7 +158,7 @@ namespace storm {
STORM_LOG_THROW(false, storm::exceptions::InvalidOperationException, "Computing bounded reachability probabilities is unsupported for this value type.");
}
template<typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type= 0>
template<typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type>
void SparseMarkovAutomatonCslHelper::printTransitions(const uint64_t N, ValueType const diff,
storm::storage::SparseMatrix<ValueType> const &fullTransitionMatrix,
std::vector<ValueType> const &exitRateVector, storm::storage::BitVector const &markovianStates,
@ -234,7 +234,7 @@ namespace storm {
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type>
void SparseMarkovAutomatonCslHelper::calculateVu(std::vector<std::vector<ValueType>> const& relativeReachability, OptimizationDirection dir, uint64_t k, uint64_t node, uint64_t const kind, ValueType lambda, uint64_t probSize, std::vector<std::vector<std::vector<ValueType>>>& unifVectors, storm::storage::SparseMatrix<ValueType> const& fullTransitionMatrix, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::unique_ptr<storm::solver::MinMaxLinearEquationSolver<ValueType>> const& solver, std::ofstream& logfile, std::vector<double> const& poisson){
void SparseMarkovAutomatonCslHelper::calculateVu(Environment const& env, std::vector<std::vector<ValueType>> const& relativeReachability, OptimizationDirection dir, uint64_t k, uint64_t node, uint64_t const kind, ValueType lambda, uint64_t probSize, std::vector<std::vector<std::vector<ValueType>>>& unifVectors, storm::storage::SparseMatrix<ValueType> const& fullTransitionMatrix, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::unique_ptr<storm::solver::MinMaxLinearEquationSolver<ValueType>> const& solver, std::ofstream& logfile, std::vector<double> const& poisson){
if (unifVectors[1][k][node]!=-1){return;} //dynamic programming. avoiding multiple calculation.
uint64_t N = unifVectors[1].size()-1;
auto rowGroupIndices = fullTransitionMatrix.getRowGroupIndices();
@ -242,7 +242,7 @@ namespace storm {
ValueType res =0;
for (uint64_t i = k ; i < N ; i++ ){
if (unifVectors[2][N-1-(i-k)][node]==-1){
calculateUnifPlusVector(N-1-(i-k),node,2,lambda,probSize,relativeReachability,dir,unifVectors,fullTransitionMatrix, markovianStates,psiStates,solver, logfile, poisson);
calculateUnifPlusVector(env, N-1-(i-k),node,2,lambda,probSize,relativeReachability,dir,unifVectors,fullTransitionMatrix, markovianStates,psiStates,solver, logfile, poisson);
//old: relativeReachability, dir, (N-1-(i-k)),node,lambda,wu,fullTransitionMatrix,markovianStates,psiStates, solver);
}
res+=poisson[i]*unifVectors[2][N-1-(i-k)][node];
@ -253,8 +253,8 @@ namespace storm {
template<typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type= 0>
void SparseMarkovAutomatonCslHelper::calculateUnifPlusVector(uint64_t k, uint64_t node, uint64_t const kind, ValueType lambda, uint64_t probSize,
template<typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type>
void SparseMarkovAutomatonCslHelper::calculateUnifPlusVector(Environment const& env, uint64_t k, uint64_t node, uint64_t const kind, ValueType lambda, uint64_t probSize,
std::vector<std::vector<ValueType>> const &relativeReachability,
OptimizationDirection dir,
std::vector<std::vector<std::vector<ValueType>>> &unifVectors,
@ -312,7 +312,7 @@ namespace storm {
for (auto &element : line){
uint64_t to = element.getColumn();
if (unifVectors[kind][k+1][to]==-1){
calculateUnifPlusVector(k+1,to,kind,lambda,probSize,relativeReachability,dir,unifVectors,fullTransitionMatrix,markovianStates,psiStates,solver, logfile, poisson);
calculateUnifPlusVector(env, k+1,to,kind,lambda,probSize,relativeReachability,dir,unifVectors,fullTransitionMatrix,markovianStates,psiStates,solver, logfile, poisson);
}
res+=element.getValue()*unifVectors[kind][k+1][to];
}
@ -340,7 +340,7 @@ namespace storm {
continue;
}
if (unifVectors[kind][k][to] == -1) {
calculateUnifPlusVector(k, to, kind, lambda, probSize, relativeReachability, dir,
calculateUnifPlusVector(env, k, to, kind, lambda, probSize, relativeReachability, dir,
unifVectors, fullTransitionMatrix, markovianStates,
psiStates, solver, logfile, poisson);
}
@ -351,7 +351,7 @@ namespace storm {
}
}
solver->solveEquations(dir, x, b);
solver->solveEquations(env, dir, x, b);
@ -366,7 +366,7 @@ namespace storm {
}
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type=0>
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type>
uint64_t SparseMarkovAutomatonCslHelper::trajans(storm::storage::SparseMatrix<ValueType> const& transitionMatrix, uint64_t node, std::vector<uint64_t >& disc, std::vector<uint64_t >& finish, uint64_t* counter) {
auto const& rowGroupIndice = transitionMatrix.getRowGroupIndices();
@ -394,7 +394,7 @@ namespace storm {
return finish[node];
}
template<typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type= 0>
template<typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type>
void SparseMarkovAutomatonCslHelper::identify(
storm::storage::SparseMatrix<ValueType> const &fullTransitionMatrix,
storm::storage::BitVector const &markovianStates, storm::storage::BitVector const& psiStates) {
@ -433,7 +433,7 @@ namespace storm {
std:: cout << "prob States :" << probStates <<" markovian States: " << markStates << " realProb: "<< realProb << " NDM: " << NDM << " Alternating: " << Alternating << "\n";
}
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type=0>
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type>
storm::storage::BitVector SparseMarkovAutomatonCslHelper::identifyProbCyclesGoalStates(storm::storage::SparseMatrix<ValueType> const& transitionMatrix, storm::storage::BitVector const& cycleStates) {
storm::storage::BitVector goalStates(cycleStates.size(), false);
@ -457,7 +457,7 @@ namespace storm {
}
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type=0>
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type>
storm::storage::BitVector SparseMarkovAutomatonCslHelper::identifyProbCycles(storm::storage::SparseMatrix<ValueType> const& transitionMatrix, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates){
storm::storage::BitVector const& probabilisticStates = ~markovianStates;
@ -491,7 +491,7 @@ namespace storm {
}
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type=0>
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type>
void SparseMarkovAutomatonCslHelper::deleteProbDiagonals(storm::storage::SparseMatrix<ValueType>& transitionMatrix, storm::storage::BitVector const& markovianStates){
auto const& rowGroupIndices = transitionMatrix.getRowGroupIndices();
@ -526,7 +526,7 @@ namespace storm {
}
template<typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type>
std::vector<ValueType> SparseMarkovAutomatonCslHelper::unifPlus(OptimizationDirection dir,
std::vector<ValueType> SparseMarkovAutomatonCslHelper::unifPlus(Environment const& env, OptimizationDirection dir,
std::pair<double, double> const &boundsPair,
std::vector<ValueType> const &exitRateVector,
storm::storage::SparseMatrix<ValueType> const &transitionMatrix,
@ -615,15 +615,14 @@ namespace storm {
}
//create equitation solver
storm::solver::MinMaxLinearEquationSolverRequirements requirements = minMaxLinearEquationSolverFactory.getRequirements(
true, dir);
storm::solver::MinMaxLinearEquationSolverRequirements requirements = minMaxLinearEquationSolverFactory.getRequirements(env, true, dir);
requirements.clearBounds();
STORM_LOG_THROW(requirements.empty(), storm::exceptions::UncheckedRequirementException,
"Cannot establish requirements for solver.");
std::unique_ptr<storm::solver::MinMaxLinearEquationSolver<ValueType>> solver;
if (probSize != 0) {
solver = minMaxLinearEquationSolverFactory.create(probMatrix);
solver = minMaxLinearEquationSolverFactory.create(env, probMatrix);
solver->setHasUniqueSolution();
solver->setBounds(storm::utility::zero<ValueType>(), storm::utility::one<ValueType>());
solver->setRequirementsChecked();
@ -692,13 +691,13 @@ namespace storm {
// (5) calculate vectors and maxNorm
for (uint64_t i = 0; i < numberOfStates; i++) {
for (uint64_t k = N; k <= N; k--) {
calculateUnifPlusVector(k, i, 0, lambda, probSize, relReachability, dir, unifVectors,
calculateUnifPlusVector(env, k, i, 0, lambda, probSize, relReachability, dir, unifVectors,
fullTransitionMatrix, markovianStates, psiStates, solver, logfile,
poisson);
calculateUnifPlusVector(k, i, 2, lambda, probSize, relReachability, dir, unifVectors,
calculateUnifPlusVector(env, k, i, 2, lambda, probSize, relReachability, dir, unifVectors,
fullTransitionMatrix, markovianStates, psiStates, solver, logfile,
poisson);
calculateVu(relReachability, dir, k, i, 1, lambda, probSize, unifVectors,
calculateVu(env, relReachability, dir, k, i, 1, lambda, probSize, unifVectors,
fullTransitionMatrix, markovianStates, psiStates, solver, logfile,
poisson);
//also use iteration to keep maxNorm of vd and vup to date, so the loop-condition is easy to prove
@ -728,7 +727,7 @@ namespace storm {
}
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type>
std::vector<ValueType> SparseMarkovAutomatonCslHelper::computeBoundedUntilProbabilitiesImca(OptimizationDirection dir, storm::storage::SparseMatrix<ValueType> const& transitionMatrix, std::vector<ValueType> const& exitRateVector, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::pair<double, double> const& boundsPair, storm::solver::MinMaxLinearEquationSolverFactory<ValueType> const& minMaxLinearEquationSolverFactory) {
std::vector<ValueType> SparseMarkovAutomatonCslHelper::computeBoundedUntilProbabilitiesImca(Environment const& env, OptimizationDirection dir, storm::storage::SparseMatrix<ValueType> const& transitionMatrix, std::vector<ValueType> const& exitRateVector, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::pair<double, double> const& boundsPair, storm::solver::MinMaxLinearEquationSolverFactory<ValueType> const& minMaxLinearEquationSolverFactory) {
STORM_LOG_TRACE("Using IMCA's technique to compute bounded until probabilities.");
uint64_t numberOfStates = transitionMatrix.getRowGroupCount();
@ -793,15 +792,15 @@ namespace storm {
}
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type>
std::vector<ValueType> SparseMarkovAutomatonCslHelper::computeBoundedUntilProbabilities(OptimizationDirection dir, storm::storage::SparseMatrix<ValueType> const& transitionMatrix, std::vector<ValueType> const& exitRateVector, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::pair<double, double> const& boundsPair, storm::solver::MinMaxLinearEquationSolverFactory<ValueType> const& minMaxLinearEquationSolverFactory) {
std::vector<ValueType> SparseMarkovAutomatonCslHelper::computeBoundedUntilProbabilities(Environment const& env, OptimizationDirection dir, storm::storage::SparseMatrix<ValueType> const& transitionMatrix, std::vector<ValueType> const& exitRateVector, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::pair<double, double> const& boundsPair, storm::solver::MinMaxLinearEquationSolverFactory<ValueType> const& minMaxLinearEquationSolverFactory) {
auto const& markovAutomatonSettings = storm::settings::getModule<storm::settings::modules::MarkovAutomatonSettings>();
if (markovAutomatonSettings.getTechnique() == storm::settings::modules::MarkovAutomatonSettings::BoundedReachabilityTechnique::Imca) {
return computeBoundedUntilProbabilitiesImca(dir, transitionMatrix, exitRateVector, markovianStates, psiStates, boundsPair, minMaxLinearEquationSolverFactory);
return computeBoundedUntilProbabilitiesImca(env, dir, transitionMatrix, exitRateVector, markovianStates, psiStates, boundsPair, minMaxLinearEquationSolverFactory);
} else {
STORM_LOG_ASSERT(markovAutomatonSettings.getTechnique() == storm::settings::modules::MarkovAutomatonSettings::BoundedReachabilityTechnique::UnifPlus, "Unknown solution technique.");
return unifPlus(dir, boundsPair, exitRateVector, transitionMatrix, markovianStates, psiStates, minMaxLinearEquationSolverFactory);
return unifPlus(env, dir, boundsPair, exitRateVector, transitionMatrix, markovianStates, psiStates, minMaxLinearEquationSolverFactory);
}
}

8
src/storm/modelchecker/csl/helper/SparseMarkovAutomatonCslHelper.h
View File

@ -30,13 +30,13 @@ namespace storm {
*
*/
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type=0>
static std::vector<ValueType> unifPlus(OptimizationDirection dir, std::pair<double, double> const& boundsPair, std::vector<ValueType> const& exitRateVector, storm::storage::SparseMatrix<ValueType> const& transitionMatrix, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, storm::solver::MinMaxLinearEquationSolverFactory<ValueType> const& minMaxLinearEquationSolverFactory);
static std::vector<ValueType> unifPlus(Environment const& env, OptimizationDirection dir, std::pair<double, double> const& boundsPair, std::vector<ValueType> const& exitRateVector, storm::storage::SparseMatrix<ValueType> const& transitionMatrix, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, storm::solver::MinMaxLinearEquationSolverFactory<ValueType> const& minMaxLinearEquationSolverFactory);
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type = 0>
static std::vector<ValueType> computeBoundedUntilProbabilities(Environment const& env, OptimizationDirection dir, storm::storage::SparseMatrix<ValueType> const& transitionMatrix, std::vector<ValueType> const& exitRateVector, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::pair<double, double> const& boundsPair, storm::solver::MinMaxLinearEquationSolverFactory<ValueType> const& minMaxLinearEquationSolverFactory);
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type = 0>
static std::vector<ValueType> computeBoundedUntilProbabilitiesImca(OptimizationDirection dir, storm::storage::SparseMatrix<ValueType> const& transitionMatrix, std::vector<ValueType> const& exitRateVector, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::pair<double, double> const& boundsPair, storm::solver::MinMaxLinearEquationSolverFactory<ValueType> const& minMaxLinearEquationSolverFactory);
static std::vector<ValueType> computeBoundedUntilProbabilitiesImca(Environment const& env, OptimizationDirection dir, storm::storage::SparseMatrix<ValueType> const& transitionMatrix, std::vector<ValueType> const& exitRateVector, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::pair<double, double> const& boundsPair, storm::solver::MinMaxLinearEquationSolverFactory<ValueType> const& minMaxLinearEquationSolverFactory);
template <typename ValueType, typename std::enable_if<!storm::NumberTraits<ValueType>::SupportsExponential, int>::type = 0>
static std::vector<ValueType> computeBoundedUntilProbabilities(Environment const& env, OptimizationDirection dir, storm::storage::SparseMatrix<ValueType> const& transitionMatrix, std::vector<ValueType> const& exitRateVector, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::pair<double, double> const& boundsPair, storm::solver::MinMaxLinearEquationSolverFactory<ValueType> const& minMaxLinearEquationSolverFactory);
@ -62,7 +62,7 @@ namespace storm {
static void identify(storm::storage::SparseMatrix<ValueType> const& fullTransitionMatrix, storm::storage::BitVector const& markovianStates,storm::storage::BitVector const& psiStates);
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type=0>
static void calculateUnifPlusVector(uint64_t k, uint64_t node, uint64_t const kind, ValueType lambda, uint64_t probSize, std::vector<std::vector<ValueType>> const& relativeReachability, OptimizationDirection dir, std::vector<std::vector<std::vector<ValueType>>>& unifVectors, storm::storage::SparseMatrix<ValueType> const& fullTransitionMatrix, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::unique_ptr<storm::solver::MinMaxLinearEquationSolver<ValueType>> const& solver, std::ofstream& logfile, std::vector<double> const& poisson);
static void calculateUnifPlusVector(Environment const& env, uint64_t k, uint64_t node, uint64_t const kind, ValueType lambda, uint64_t probSize, std::vector<std::vector<ValueType>> const& relativeReachability, OptimizationDirection dir, std::vector<std::vector<std::vector<ValueType>>>& unifVectors, storm::storage::SparseMatrix<ValueType> const& fullTransitionMatrix, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::unique_ptr<storm::solver::MinMaxLinearEquationSolver<ValueType>> const& solver, std::ofstream& logfile, std::vector<double> const& poisson);
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type=0>
static void deleteProbDiagonals(storm::storage::SparseMatrix<ValueType>& transitionMatrix, storm::storage::BitVector const& markovianStates);
@ -421,7 +421,7 @@ remark :
*
*/
template <typename ValueType, typename std::enable_if<storm::NumberTraits<ValueType>::SupportsExponential, int>::type=0>
static void calculateVu(std::vector<std::vector<ValueType>> const& relativeReachability, OptimizationDirection dir, uint64_t k, uint64_t node, uint64_t const kind, ValueType lambda, uint64_t probSize, std::vector<std::vector<std::vector<ValueType>>>& unifVectors, storm::storage::SparseMatrix<ValueType> const& fullTransitionMatrix, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::unique_ptr<storm::solver::MinMaxLinearEquationSolver<ValueType>> const& solver, std::ofstream& logfile, std::vector<double> const& poisson);
static void calculateVu(Environment const& env, std::vector<std::vector<ValueType>> const& relativeReachability, OptimizationDirection dir, uint64_t k, uint64_t node, uint64_t const kind, ValueType lambda, uint64_t probSize, std::vector<std::vector<std::vector<ValueType>>>& unifVectors, storm::storage::SparseMatrix<ValueType> const& fullTransitionMatrix, storm::storage::BitVector const& markovianStates, storm::storage::BitVector const& psiStates, std::unique_ptr<storm::solver::MinMaxLinearEquationSolver<ValueType>> const& solver, std::ofstream& logfile, std::vector<double> const& poisson);

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