Edited static_sparse_matrix.h, replaced all calloc/malloc calls with std::new

Removed calls to exceptions with parameter "const char *", is illegal
Fixed a warning in read_tra_file.cpp

.gitignore

@@ -22,6 +22,9 @@
 *.unsuccessfulbuild
 ipch/
 obj/
-
+CMakeFiles/
 # The build Dir
 build//CMakeLists.txt
+/*.vcxproj
+/*.filters
+/*.sln

CMakeLists.txt

@@ -91,12 +91,12 @@ endif()
 find_package(Pantheios REQUIRED COMPONENTS SimpleFrontEnd File)
 
     
-IF (PANTHEIOS_FOUND)
+if (PANTHEIOS_FOUND)
     include_directories(${PANTHEIOS_INCLUDE_DIR})
     link_directories(${PANTHEIOS_LIBRARY_DIRS})
 else()
     message(STATUS "NO PANTHEIOS!")
-ENDIF()
+endif()
     
 if(Boost_FOUND)
 	include_directories(${Boost_INCLUDE_DIRS})
@@ -131,25 +131,25 @@ COMMENT "Generating API documentation with Doxygen" VERBATIM
 endif(DOXYGEN_FOUND)
 
 if (GTEST_FOUND)
-# For make-based builds, defines make target named test.
-# For Visual Studio builds, defines Visual Studio project named RUN_TESTS.
-enable_testing()
+	# For make-based builds, defines make target named test.
+	# For Visual Studio builds, defines Visual Studio project named RUN_TESTS.
+	enable_testing()
 
-include_directories(${GTEST_INCLUDE_DIRS})
-target_link_libraries(MRMC-tests ${GTEST_LIBRARIES})
+	include_directories(${GTEST_INCLUDE_DIRS})
+	target_link_libraries(MRMC-tests ${GTEST_LIBRARIES})
 
-add_test(
+	add_test(
 		NAME MRMC-tests
 		COMMAND MRMC-tests
-)
-
+	)
+	if( MSVC ) # VS2012 doesn't support correctly the tuples yet
+		add_definitions( /D _VARIADIC_MAX=10 )
+	endif()
 endif(GTEST_FOUND)
 
 
 if (THREADS_FOUND)
-
-include_directories(${THREADS_INCLUDE_DIRS})
-target_link_libraries (MRMC-tests ${CMAKE_THREAD_LIBS_INIT})
-target_link_libraries (MRMC-cpp ${CMAKE_THREAD_LIBS_INIT})
-
+	include_directories(${THREADS_INCLUDE_DIRS})
+	target_link_libraries (MRMC-tests ${CMAKE_THREAD_LIBS_INIT})
+	target_link_libraries (MRMC-cpp ${CMAKE_THREAD_LIBS_INIT})
 endif(THREADS_FOUND)

src/mrmc-cpp.cpp

@@ -22,6 +22,7 @@ PANTHEIOS_EXTERN_C PAN_CHAR_T const PANTHEIOS_FE_PROCESS_IDENTITY[] = "mrmc-cpp"
 #include "MRMCConfig.h"
 
 #include "src/sparse/static_sparse_matrix.h"
+#include "src/dtmc/atomic_proposition.h"
  
 int main(int argc, char* argv[]) {
 	// Logging init

src/parser/read_tra_file.cpp

@@ -24,6 +24,9 @@ namespace mrmc {
 
 namespace parser{
 
+// Disable C4996 - This function or variable may be unsafe.
+#pragma warning(disable:4996)
+
 /*!
 * This method does the first pass through the .tra file and computes
 * the number of non zero elements that are not diagonal elements,

src/sparse/static_sparse_matrix.h

@@ -2,6 +2,7 @@
 #define MRMC_SPARSE_STATIC_SPARSE_MATRIX_H_
 
 #include <exception>
+#include <new>
 #include "boost/integer/integer_mask.hpp"
 
 #include <pantheios/pantheios.hpp>
@@ -46,16 +47,20 @@ class StaticSparseMatrix {
 
 	~StaticSparseMatrix() {
 		if (value_storage != NULL) {
-			free(value_storage);
+			//free(value_storage);
+			delete value_storage;
 		}
 		if (column_indications != NULL) {
-			free(column_indications);
+			//free(column_indications);
+			delete column_indications;
 		}
 		if (row_indications != NULL) {
-			free(row_indications);
+			//free(row_indications);
+			delete row_indications;
 		}
 		if (diagonal_storage != NULL) {
-			free(diagonal_storage);
+			//free(diagonal_storage);
+			delete diagonal_storage;
 		}
 	}
 
@@ -116,22 +121,22 @@ class StaticSparseMatrix {
 		storage_size = non_zero_entry_count;
 		last_row = 0;
 
-		value_storage = static_cast<T*>(calloc(storage_size, sizeof(*value_storage)));
+		//value_storage = static_cast<T*>(calloc(storage_size, sizeof(*value_storage)));
+		value_storage = new (std::nothrow) T[storage_size]();
 
-		column_indications = static_cast<uint_fast32_t*>(calloc(storage_size, sizeof(*column_indications)));
+		//column_indications = static_cast<uint_fast32_t*>(calloc(storage_size, sizeof(*column_indications)));
+		column_indications = new (std::nothrow) uint_fast32_t[storage_size]();
 
-		row_indications = static_cast<uint_fast32_t*>(calloc(row_count + 1, sizeof(*row_indications)));
+		//row_indications = static_cast<uint_fast32_t*>(calloc(row_count + 1, sizeof(*row_indications)));
+		row_indications = new (std::nothrow) uint_fast32_t[row_count + 1]();
 
 		// row_count + 1 so that access with 1-based indices can be direct without the overhead of a -1 each time
-		diagonal_storage = static_cast<T*>(calloc(row_count + 1, sizeof(*diagonal_storage)));
+		//diagonal_storage = static_cast<T*>(calloc(row_count + 1, sizeof(*diagonal_storage)));
+		diagonal_storage = new (std::nothrow) T[row_count + 1]();
 		
 		if ((value_storage == NULL) || (column_indications == NULL) || (row_indications == NULL) || (diagonal_storage == NULL)) {
 			pantheios::log_ERROR("StaticSparseMatrix::initialize: Throwing bad_alloc: memory allocation failed");
-#ifdef _WIN32
-			throw std::bad_alloc("mrmc::StaticSparseMatrix::initialize: memory allocation failed");
-#else
 			throw std::bad_alloc();
-#endif
 		}
 	}