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//=====================================================
// File : blitz_interface.hh
// Author : L. Plagne <laurent.plagne@edf.fr)>
// Copyright (C) EDF R&D, lun sep 30 14:23:30 CEST 2002
// Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
//=====================================================
//
// This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
//
// This program is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
// GNU General Public License for more details.
// You should have received a copy of the GNU General Public License
// along with this program; if not, write to the Free Software
// Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.
//
#ifndef BLITZ_INTERFACE_HH
#define BLITZ_INTERFACE_HH
#include <blitz/blitz.h>
#include <blitz/array.h>
#include <blitz/vector-et.h>
#include <blitz/vecwhere.h>
#include <blitz/matrix.h>
#include <vector>
BZ_USING_NAMESPACE(blitz)
template<class real> class blitz_interface{
public :
typedef real real_type ;
typedef std::vector<real> stl_vector; typedef std::vector<stl_vector > stl_matrix;
typedef blitz::Array<real, 2> gene_matrix; typedef blitz::Array<real, 1> gene_vector; // typedef blitz::Matrix<real, blitz::ColumnMajor> gene_matrix;
// typedef blitz::Vector<real> gene_vector;
static inline std::string name() { return "blitz"; }
static void free_matrix(gene_matrix & A, int N){}
static void free_vector(gene_vector & B){}
static inline void matrix_from_stl(gene_matrix & A, stl_matrix & A_stl){ A.resize(A_stl[0].size(),A_stl.size()); for (int j=0; j<A_stl.size() ; j++){ for (int i=0; i<A_stl[j].size() ; i++){ A(i,j)=A_stl[j][i]; } } }
static inline void vector_from_stl(gene_vector & B, stl_vector & B_stl){ B.resize(B_stl.size()); for (int i=0; i<B_stl.size() ; i++){ B(i)=B_stl[i]; } }
static inline void vector_to_stl(gene_vector & B, stl_vector & B_stl){ for (int i=0; i<B_stl.size() ; i++){ B_stl[i]=B(i); } }
static inline void matrix_to_stl(gene_matrix & A, stl_matrix & A_stl){ int N=A_stl.size(); for (int j=0;j<N;j++){ A_stl[j].resize(N); for (int i=0;i<N;i++) A_stl[j][i] = A(i,j); } }
static inline void matrix_matrix_product(const gene_matrix & A, const gene_matrix & B, gene_matrix & X, int N) { firstIndex i; secondIndex j; thirdIndex k; X = sum(A(i,k) * B(k,j), k); }
static inline void ata_product(const gene_matrix & A, gene_matrix & X, int N) { firstIndex i; secondIndex j; thirdIndex k; X = sum(A(k,i) * A(k,j), k); }
static inline void aat_product(const gene_matrix & A, gene_matrix & X, int N) { firstIndex i; secondIndex j; thirdIndex k; X = sum(A(i,k) * A(j,k), k); }
static inline void matrix_vector_product(gene_matrix & A, gene_vector & B, gene_vector & X, int N) { firstIndex i; secondIndex j; X = sum(A(i,j)*B(j),j); }
static inline void atv_product(gene_matrix & A, gene_vector & B, gene_vector & X, int N) { firstIndex i; secondIndex j; X = sum(A(j,i) * B(j),j); }
static inline void axpy(const real coef, const gene_vector & X, gene_vector & Y, int N) { firstIndex i; Y = Y(i) + coef * X(i); //Y += coef * X;
}
static inline void copy_matrix(const gene_matrix & source, gene_matrix & cible, int N){ cible = source; //cible.template operator=<gene_matrix>(source);
// for (int i=0;i<N;i++){
// for (int j=0;j<N;j++){
// cible(i,j)=source(i,j);
// }
// }
}
static inline void copy_vector(const gene_vector & source, gene_vector & cible, int N){ //cible.template operator=<gene_vector>(source);
cible = source; }
};
#endif
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